IBM has a tool called Rational Automation Framework that can duplicate / automate all the WAS Configuration.
In short, you point it to the enviournment you want to duplicate, and it will read it, and then point it to the new location and it creates a duplicate env. there.
here is a link for that tool:
www-01.ibm.com/software/rational/product...
I hope this is helpful.
Take Care,
Mohammad