Hi Gabriel,
I think there is one thing which is important to remember: It's not MQ as such which is installed as a Multi-instance MQ Manager - it's the MQ instances which must reside on a shared file-system such as GPFS or NFSv4, which enables a Multi-instance MQ setup.
You first create a new instance from the primary server, which is where you normally would want an Multi-instance to run;
crtmqm -ld /MQHA/logs -md /MQHA/qmgrs QM1
where /MQHA is the path to shared file system. The add info about this instance on the secondary server:
addmqinf -s QueueManager -v Name=QM1 -v Directory=QM1 -v Prefix=/MQHA/logs -v DataPath=/MQHA/qmgrs
You should now start MQ from the primary server so it can get a lock on the MQ instance on the file system
strmqm -x QM1
and repeat this command on the secondary server, so it will try to get a lock on the MQ instance - which will fail until MQ ends on the primary server.
The above commands are sketchy - you should add more details such a Dead-letter queues and size of log files.
Brgds, Anders.