Hi Alonzo
Without your account ID to hand I can't confirm what I am going to say to you, maybe you can verify this. Please do not reply on a public forum with your account ID.
If you go to Settings / Cloud Extender settings you will see the settings configured which might have been modified at time of installation of Cloud Extender. This would determine whether AutoQuarantine was being used on Cloud Extender, or on the Exchange server, or not at all.
The devices that report "Mailbox Managed" means that the device actually has 2 records in the MaaS360 platform - an MDM record (enrolled device) and/or an Exchange AS device (coming through Cloud Extender from Exchange). When the platform receives records from activated mail devices, it compares these with existing enrolled devices using specific criteria, and if appropriate merges them so that what you see is actually the result of the merge, where you have an MDM and an Exchange record together. The proof of this would be where in the device in Inventory, you go into the device and can see actions (top-right) for both Device actions (MDM) and Exchange actions. To see any devices where this merge process did not happen you can go to Devices > Exceptions and merge them manually. These occur where the information coming from the Cloud Extender / Exchange integration doesn't provide conclusive evidence to be able to merge the records with confidence.
If you need help in terms of whether anything is not actually working correctly please raise a Support ticket and the team will follow up. Alternatively without your account ID - which should not be posted here to respect your privacy - I can answer any more general questions you have.
Best regards
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Eamonn O'Mahony
Technical Client Success Manager
IBM Security
Dublin, Ireland
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