Thanks Holger & MR as173d for your intrest,
I am using websphere MQ & file system template & my JNDI connection is working fine.
while i am using the same JNDI connection to do JMS settings, it provides an error.
"com.wm.app.b2b.server.jms.JMSSubsystemException: [ISS.0134.9016] Error creating connection factory: javax.naming.NameNotFoundException: "
I have the following jars in IntegrationServer/lib/jar folder:
rmm.jar, poviderutil.jar, ldap.jar, jta.jar , jndi.jar, jms.jar , com.ibm.mqetclient.jar,dhbcore, fscontext
com.ibm.mq.tools.ras.jar, com.ibm.mq.soap.jar, com.ibm.mq.postcard.jar, com.ibm.mq.defaultconfig.jar
com.ibm.mq.pcf, com.ibm.mq. commonservices.jar, com.ibm.mq.jmqi, com.ibm.mq.headers, com.ibm.mq,
#Integration-Server-and-ESB#webMethods-General#webMethods