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Shali Boharon

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issue running LSF commands from docker job

Posted By Shali Boharon Sun November 05, 2023 08:11 AM
Found In Egroup: High Performance Computing Group \ view thread
Hi We need to run LSF command from a docker session. By changing the name of the running container to match the hostname of the hosting host we are able to run : bjobs and bsub in batch mode. We have issue submitting interactive jobs or running with -K and when using bwait. I guess ...

RUNLIMIT configuration

Posted By Shali Boharon Mon July 24, 2023 02:46 AM
Found In Egroup: High Performance Computing Group \ view thread
Hello, I'm looking for some configuration tip. in lsb.queues we have this : RUNLIMIT = 130 240 So users can bmod their job to run longer But I'm looking for configuration that will set, for some users. the default as 240 . Something like : If user USER ...

RE: /run/user/UID directory on Excecution hosts

Posted By Shali Boharon Wed October 26, 2022 09:15 AM
Found In Egroup: High Performance Computing Group \ view thread
Thanks, I've tried it. The directory was not created, We probably can ignore this error message. I was wondering if anyone found a workaround for this, ------------------------------ Shali Boharon ------------------------------

/run/user/UID directory on Excecution hosts

Posted By Shali Boharon Tue October 25, 2022 11:01 AM
Found In Egroup: High Performance Computing Group \ view thread
We have noticed few tools ( probably gui based ) give error when running with bsub Error message is like : XDG_RUNTIME_DIR point to non-existing path '/run/user/18995' ..... When running the tool on the user VDI, it is OK. That directory is being created when a user interactively login 'ssh' ...